|
Transcripts
expressed at ³ 3 copies/cell whose expression is at
least 2 fold higher in each cancer compared to its corresponding
normal tissue. CC, colon cancer; BC, brain cancer; BrC,
breast cancer; LC, lung cancer; M, melanoma; NC, normal
colon epithelium; NB, normal brain; NBr, normal breast
epithelium; NL, normal lung epithelium; NM, normal melanocytes.
Tag sequence denotes the 10bp tag adjacent to the 4bp
NlaIII anchoring enzyme site and Avg T/N is the average
ratio of expression in tumor tissue divided by normal
tissue (for the purpose of obtaining this ratio, expression
values of 0 are converted to 0.5). UniGene Description
provides a description of each matching UniGene cluster
(From UniGene Build #67).
|
|
Cancer
tissues |
Normal
Tissues |
|
|
Tag
Sequence |
CC |
BC |
BrC |
LC |
M |
NC |
NB |
NBr |
NL |
NM |
Average
T/N |
UniGene
Description |
|
ATGTGTAACG |
93 |
72 |
13 |
5 |
48 |
0 |
0 |
3 |
0 |
0 |
30 |
S100
calcium-binding protein A4 (calcium protein, calvasculin,
metastasin) |
|
CCCTGCCTTG |
53 |
66 |
120 |
56 |
20 |
21 |
27 |
0 |
8 |
0 |
21 |
Midkine
(neurite growth-promoting factor 2) |
|
GTGCGCTGAG |
85 |
103 |
380 |
23 |
58 |
0 |
30 |
56 |
0 |
8 |
18 |
Major
histocompatibility complex, class I, C |
|
CTGGCCGCTC |
26 |
19 |
53 |
16 |
25 |
3 |
1 |
0 |
0 |
5 |
14 |
Apoptosis
inhibitor 4 (survivin) |
|
GCCCCCCCGT |
38 |
40 |
54 |
31 |
29 |
9 |
7 |
3 |
3 |
0 |
12 |
ESTs |
|
TGGCCCCAGG |
13 |
201 |
8 |
24 |
336 |
0 |
30 |
3 |
3 |
19 |
9 |
Apolipoprotein
CI |
|
CCCTGGTGGG |
16 |
14 |
17 |
16 |
6 |
0 |
0 |
0 |
0 |
3 |
9 |
ESTs |
|
AGTGACCGAA |
5 |
8 |
37 |
8 |
7 |
0 |
1 |
0 |
3 |
0 |
8 |
ESTs |
|
CTGCACTTAC |
52 |
34 |
81 |
64 |
78 |
3 |
12 |
22 |
5 |
30 |
8 |
DNA
REPLICATION LICENSING FACTOR CDC47 HOMOLOG |
|
CTGGCGAGCG |
168 |
137 |
290 |
73 |
178 |
9 |
21 |
64 |
13 |
60 |
8 |
Human
ubiquitin carrier protein (E2-EPF) mRNA, complete
cds |
|
TTGCCGCTGC |
4 |
10 |
12 |
19 |
7 |
0 |
1 |
0 |
0 |
0 |
7 |
ESTs |
|
TGCGCTGGCC |
22 |
63 |
74 |
28 |
14 |
6 |
18 |
6 |
8 |
0 |
7 |
No
match |
|
CTCCTGGAAC |
20 |
10 |
26 |
18 |
18 |
3 |
4 |
0 |
8 |
5 |
6 |
ESTs,
Highly similar to MYO-INOSITOL-1-PHOSPHATE SYNTHASE
[Arabidopsis thaliana] |
|
CGCCCGTCGT |
4 |
151 |
30 |
9 |
30 |
0 |
13 |
6 |
0 |
5 |
6 |
No
match |
|
TTGCCCCCGT |
10 |
61 |
15 |
19 |
23 |
0 |
22 |
6 |
5 |
0 |
6 |
AXL
receptor tyrosine kinase |
|
TTGCTAAAGG |
8 |
8 |
16 |
16 |
22 |
3 |
0 |
3 |
8 |
0 |
6 |
ESTs,
Weakly similar to KIAA0005 [H.sapiens] |
|
AGCCACGTTG |
13 |
8 |
11 |
11 |
6 |
0 |
0 |
0 |
0 |
3 |
6 |
Acid
phosphatase 1, soluble |
|
CCTGGGCACT |
14 |
6 |
23 |
22 |
8 |
3 |
1 |
3 |
3 |
0 |
6 |
ESTs,
Highly similar to transcription factor ARF6 chain
B [M.musculus] |
|
GGGCTCACCT |
23 |
13 |
52 |
16 |
17 |
3 |
4 |
6 |
3 |
5 |
6 |
Homo
sapiens clone 24767 mRNA sequence / ESTs, Weakly
similar to colt [D.melanogaster] |
|
CTTACAGCCA |
11 |
6 |
19 |
12 |
6 |
0 |
0 |
3 |
0 |
3 |
6 |
ESTs |
|
AGGGCCCTCA |
14 |
6 |
15 |
5 |
4 |
0 |
3 |
0 |
0 |
0 |
6 |
Homo
sapiens mRNA, complete cds |
|
GGGTAATGTG |
7 |
13 |
5 |
11 |
12 |
0 |
1 |
0 |
0 |
5 |
5 |
ESTs,
Moderately similar to unknown [M.musculus] |
|
CTGACAGCCC |
4 |
5 |
17 |
7 |
9 |
0 |
1 |
0 |
0 |
3 |
5 |
Human
mRNA for HsMcm6, complete cds |
|
TGACCTCCAG |
7 |
14 |
15 |
12 |
11 |
0 |
6 |
3 |
3 |
0 |
5 |
ESTs,
Weakly similar to No definition line found [C.elegans]
/ ESTs |
|
AAACCTCTTC |
10 |
5 |
12 |
11 |
8 |
0 |
1 |
3 |
0 |
3 |
5 |
ESTs,
Highly similar to G2/MITOTIC-SPECIFIC CYCLIN B2
[Mesocricetus auratus] |
|
TCATTGCACT |
7 |
13 |
5 |
4 |
9 |
3 |
1 |
0 |
0 |
0 |
5 |
ESTs,
Highly similar to HYPOTHETICAL 16.3 KD PROTEIN
[Saccharomyces cerevisiae] |
|
CCCCCTCCGG |
31 |
14 |
73 |
38 |
58 |
15 |
3 |
8 |
19 |
11 |
5 |
Small
nuclear ribonucleoprotein polypeptide N / B and
B1 |
|
GTAGGGGCCT |
11 |
14 |
11 |
19 |
18 |
3 |
6 |
0 |
3 |
8 |
4 |
ESTs |
|
GAACCCAAAG |
7 |
8 |
12 |
8 |
10 |
0 |
0 |
3 |
3 |
3 |
4 |
Plasminogen
/ PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A |
|
TGTGAGCCTC |
5 |
11 |
11 |
7 |
7 |
0 |
3 |
0 |
0 |
3 |
4 |
Cyclin
F |
|
ATCTCTGGAG |
7 |
3 |
9 |
8 |
7 |
0 |
0 |
0 |
0 |
3 |
4 |
ESTs |
|
AAAGTGCATC |
10 |
19 |
11 |
4 |
7 |
0 |
9 |
0 |
0 |
3 |
4 |
No
match |
|
GCCTTGGGTG |
7 |
8 |
4 |
9 |
10 |
3 |
3 |
0 |
0 |
0 |
4 |
Leukemia
inhibitory factor (cholinergic differentiation
factor) |
|
ACCTCACTCT |
9 |
3 |
12 |
16 |
9 |
0 |
0 |
6 |
3 |
3 |
4 |
ESTs |
|
TAAAGACTTG |
9 |
13 |
24 |
12 |
38 |
3 |
1 |
11 |
5 |
11 |
4 |
Adenylate
kinase 2 (adk2) |
|
TCGGCGCCGG |
15 |
16 |
21 |
14 |
6 |
6 |
3 |
8 |
3 |
0 |
4 |
SET
translocation (myeloid leukemia-associated) |
|
AACCTCGAGT |
6 |
10 |
7 |
8 |
11 |
0 |
4 |
0 |
3 |
3 |
4 |
ESTs,
Moderately similar to putative [M.musculus] |
|
GTTTACCCGC |
6 |
3 |
4 |
7 |
4 |
0 |
0 |
0 |
0 |
0 |
3 |
No
match |
|
GCCTCTGCCT |
4 |
5 |
5 |
5 |
6 |
0 |
0 |
0 |
0 |
3 |
3 |
ESTs |
|
CCTGGGTCCT |
4 |
10 |
8 |
5 |
7 |
0 |
4 |
3 |
0 |
3 |
3 |
ESTs |
|
