| back Table 5. Tissue specific transcripts
|
Tissue specific
transcripts from colon epithelium,
brain, melanocytes,
keratinocytes, breast
epithelium, lung epithelium,
prostate, and kidney
epithelium. The number in parentheses
adjacent to the tissue type indicates the percent of
transcripts exclusively expressed in a given tissue
at > 10 copies per cell. Transcript
tag denotes the 10bp tag adjacent to 4bp NlaIII anchoring
enzyme site, Copies/cell denotes the transcript copies
per cell expressed, and UniGene Description provides
a description of each matching UniGene cluster (from
UniGene Build No. 67).
|
Tag
sequence
|
Copies/cell
|
Unigene
Description
|
|
ATACTCCACT
|
431
|
Guanylate
cyclase activator 2 (guanylin, intestinal,
heat-stable)
|
|
TCAGCTGCAA
|
220
|
No
match
|
|
GTCATCACCA
|
174
|
H.sapiens
mRNA for GCAP-II/uroguanylin precursor
|
|
CCTTCAAATC
|
141
|
Carbonic
anhydrase I
|
|
ACACCCATCA
|
89
|
No
match
|
|
CCAACACCAG
|
86
|
No
match
|
|
AATAGTTTCC
|
70
|
Pregnancy-specific
beta-1 glycoprotein 6
|
|
CCAGGCGTCA
|
55
|
No
match
|
|
GAACAGCTCA
|
55
|
ESTs
|
|
TACTCGGCCA
|
46
|
No
match
|
|
GGGGGAGAAG
|
37
|
ESTs
|
|
AGTGGGCTCA
|
34
|
No
match
|
|
GAGCACCGTG
|
34
|
No
match
|
|
GATCTATCCA
|
31
|
ESTs
|
|
GAACGCCAGA
|
28
|
No
match
|
|
GCCCTCGGAG
|
28
|
ESTs
|
|
ACAAGCCTAG
|
28
|
No
match
|
|
GTCACAGGAA
|
28
|
No
match
|
|
GCCCTCGGAG
|
28
|
Human
homeobox protein Cdx2 mRNA, complete cds
|
|
CTAGGATGAT
|
28
|
ESTs
|
|
CCAACTATCG
|
24
|
No
match
|
|
CTGACGGGGA
|
24
|
ESTs
|
|
GAGGGTTTTA
|
24
|
Homo
sapiens C19steroid specific UDP-glucuronosyltransferase
mRNA, complete cds
|
|
GGGGTCCCAT
|
24
|
No
match
|
|
GCCAGGTCAC
|
21
|
No
match
|
|
AGAACACCAA
|
21
|
No
match
|
|
AATCCCGCCC
|
21
|
Homo
sapiens hAQP8 mRNA for aquaporin 8, complete
cds
|
|
ACACTGCCTC
|
18
|
No
match
|
|
AGAGTCCAGG
|
18
|
Homo
sapiens carcinoembryonic antigen (CGM2) mRNA,
complete cds
|
|
CCAGACGTAG
|
18
|
No
match
|
|
GAGGCCCCCG
|
18
|
No
match
|
|
CTGTGTGCCC
|
15
|
ESTs,
Weakly similar to tryptase-III [H.sapiens]
|
|
GAGAGGATGG
|
15
|
ESTs
|
|
GGCTGAACCA
|
15
|
No
match
|
|
CCAAATCATT
|
15
|
No
match
|
|
ACGGCTGGGC
|
15
|
No
match
|
|
ACCTTCATCT
|
15
|
EST
|
|
AGGGCTTGAG
|
15
|
No
match
|
|
ACCTTCATCT
|
15
|
Human
rearranged metabotropic glutamate receptor
type II (GLUR2) mRNA, complete cds
|
|
TCAGGCCAGA
|
15
|
No
match
|
|
CTGTGTGCCC
|
15
|
ESTs
|
|
GGATGTCAAC
|
15
|
Human
RecA-like protein (hREC2) mRNA, complete cds
|
|
ATCTGGAGCA
|
15
|
Alcohol
dehydrogenase 1 (class I), alpha polypeptide
|
|
GAGAGGATGG
|
15
|
INTEGRAL
MEMBRANE PROTEIN E16
|
|
ATCTGGAGCA
|
15
|
Alcohol
dehydrogenase 3 (class I), gamma polypeptide
|
|
GGATGTCAAC
|
15
|
Polymeric
immunoglobulin receptor
|
|
CACAGACACA
|
12
|
No
match
|
|
TGCTCCTAAC
|
12
|
No
match
|
|
TATACCCGGA
|
12
|
No
match
|
|
TATCCTGATG
|
12
|
No
match
|
|
GGCCCTCCCG
|
12
|
No
match
|
|
GTAGCGATGG
|
12
|
Pim-1
oncogene
|
|
GCAGGTTGTG
|
12
|
No
match
|
|
TGGGAACCGG
|
9
|
No
match
|
|
ACACCTCTCT
|
9
|
No
match
|
|
GGAAAACAGG
|
9
|
No
match
|
|
CAGGCGGCAC
|
9
|
No
match
|
|
CAGGTTGGTC
|
9
|
Homo
sapiens hRVP1 mRNA for RVP1, complete cds
|
|
GGGATATAAA
|
9
|
No
match
|
|
GTGGAAAATC
|
9
|
No
match
|
|
GTGTGTGAAT
|
9
|
No
match
|
|
ATGTGACACT
|
9
|
No
match
|
|
ATGGTGTAAT
|
9
|
ESTs
|
|
TCACATTGAT
|
9
|
H.sapiens
mRNA for LI-cadherin
|
|
TAACTAAACA
|
9
|
No
match
|
|
TGCCCGGGTC
|
9
|
No
match
|
|
TAGTCGGAAA
|
9
|
No
match
|
|
GCTATACGGG
|
9
|
No
match
|
|
TCACACCCCA
|
9
|
No
match
|
|
CTGCCCGAAC
|
9
|
ESTs
|
|
AGTCACCTCT
|
9
|
No
match
|
|
TCATTGGTTT
|
9
|
No
match
|
|
TCCTCTCCTC
|
9
|
No
match
|
|
CCTCTCGGCC
|
9
|
No
match
|
|
CCACTGAAGT
|
9
|
No
match
|
|
CTGGCTTGCT
|
9
|
No
match
|
|
GAAAACAGAA
|
9
|
EST
|
|
AAAGCACGTC
|
9
|
No
match
|
|
GAAAACAGAA
|
9
|
ESTs,
Weakly similar to synapse-associated protein
sap47-1 [D.melanogaster]
|
|
TTGATTCCAT
|
9
|
No
match
|
|
AAACAGGCAC
|
9
|
No
match
|
|
CTTACAGTCC
|
9
|
No
match
|
|
GAATGGACTC
|
9
|
No
match
|
|
GAACCCAAAC
|
9
|
No
match
|
|
GAAAACAGAA
|
9
|
ESTs
|
|
ACTTTGTCCC
|
237
|
Glial
fibrillary acidic protein
|
|
GTGCGAATCC
|
117
|
ESTs
|
|
CAAAAAGTTA
|
53
|
ESTs
|
|
TTAACTTTAT
|
49
|
Homo
sapiens neuroendocrine-specific protein A
(NSP) mRNA, complete cds
|
|
CAGCCAAATG
|
43
|
ESTs
|
|
GCCTGTGGTG
|
41
|
Homo
sapiens LY6H mRNA, complete cds
|
|
CTTAGGGACA
|
39
|
ESTs
|
|
TTGGAGGTGA
|
33
|
ESTs
|
|
ATTCCATTTC
|
30
|
ESTs
|
|
ATTCCATTTC
|
30
|
ESTs,
Highly similar to RAS-RELATED PROTEIN RAB-10
[Canis familiaris]
|
|
AGAGAGCGGA
|
28
|
Human
guanine nucleotide-binding regulatory protein
(Go-alpha) gene
|
|
TTCTCAATAC
|
28
|
Homo
sapiens mRNA for synaptopodin
|
|
CATCCTCCCA
|
28
|
No
match
|
|
GTATCGATTT
|
24
|
Homo
sapiens GABA-B receptor mRNA, complete cds
|
|
TTGTAAACAG
|
22
|
ESTs,
Weakly similar to cyclin I [H.sapiens]
|
|
GCCCTGTATT
|
22
|
ESTs
|
|
CCACATTGCC
|
22
|
Homo
sapiens chromosome 7q22 sequence
|
|
CAGGGCAACG
|
22
|
No
match
|
|
AAAAGCAAAT
|
22
|
Human
mRNA for MOBP (myelin-associated oligodendrocytic
basic protein), complete cds, clone hOPRP1
|
|
ACCAATCCTA
|
21
|
Human
guanine nucleotide-binding regulatory protein
(Go-alpha) gene
|
|
CTGTGTGTCC
|
19
|
AXONIN-1
PRECURSOR
|
|
TCAGACAATA
|
18
|
ESTs
|
|
TGGTGAGATG
|
18
|
ESTs
|
|
ATTTTTTGTT
|
18
|
ESTs
|
|
ACATTGAGTC
|
18
|
Homo
sapiens mRNA for MEGF4, partial cds
|
|
GTCAGTCTAC
|
16
|
Glutamate
receptor, metabotropic 3
|
|
GTCCCACTTC
|
16
|
ESTs
|
|
GGGGCCCGAA
|
16
|
No
match
|
|
TGACTCACCC
|
15
|
Homo
sapiens calmodulin-stimulated phosphodiesterase
PDE1B1 mRNA, complete cds
|
|
GACAGCGACA
|
15
|
No
match
|
|
GGTGTACATA
|
15
|
ESTs
|
|
TAGCTATAAA
|
15
|
ESTs
|
|
GGTGTACATA
|
15
|
ESTs
|
|
GTTTCATTTT
|
15
|
ESTs
|
|
AATAAATTGC
|
15
|
ESTs
|
|
GTTTCATTTT
|
15
|
ESTs
|
|
ACACATTGTA
|
15
|
No
match
|
|
TACCTATTGT
|
15
|
ESTs
|
|
TTTAGCAGAA
|
15
|
Homo
sapiens cyclin E2 mRNA, complete cds
|
|
TTTAGCAGAA
|
15
|
ESTs
|
|
CAATTTATGA
|
13
|
ESTs
|
|
GTGAAGGTTT
|
13
|
Homo
sapiens (huc) mRNA, complete cds
|
|
TGGACTTTTA
|
13
|
ESTs
|
|
CGATGCCACG
|
13
|
No
match
|
|
GTGAAGGTTT
|
13
|
Neuron-specific
RNA recognition motifs (RRMs)-containing protein
[human, hippocampus, mRNA, 1992 nt]
|
|
TGGACTTTTA
|
13
|
ESTs
|
|
CCTTCTTGTC
|
13
|
No
match
|
|
TCCATTCAAG
|
13
|
Human
clone 23586 mRNA sequence
|
|
CCTATGTATC
|
12
|
No
match
|
|
ACGGACCAAT
|
12
|
No
match
|
|
TATTATCTTG
|
12
|
ESTs
|
|
ACTTTATACG
|
12
|
ESTs
|
|
ACTTTATACG
|
12
|
ESTs,
Weakly similar to EPIDERMAL GROWTH FACTOR
RECEPTOR KINASE SUBSTRATE EPS8 [H.sapiens]
|
|
CGCAGTCCCC
|
12
|
BETA-NEOENDORPHIN-DYNORPHIN
PRECURSOR
|
|
TGTAGTGCTC
|
12
|
No
match
|
|
CTGCTTAAGT
|
12
|
ESTs,
Weakly similar to unknown [H.sapiens]
|
|
ACAAGTGGAA
|
12
|
Human
mRNA for KIAA0027 gene, partial cds
|
|
AATCCCAATG
|
10
|
Homo
sapiens mRNA for KIAA0283 gene, partial cds
|
|
ACTATGCATC
|
10
|
No
match
|
|
ACGAGTCATT
|
10
|
ESTs
|
|
TTACATTGTA
|
10
|
Homo
sapiens clone 24461 mRNA sequence
|
|
ATGCCCCCTC
|
10
|
ESTs,
Highly similar to HYPOTHETICAL 52.2 KD PROTEIN
ZK512.6 IN CHROMOSOME III [Caenorhabditis
elegans]
|
|
TTTTATTCAT
|
10
|
ESTs
|
|
ACAGAGCATT
|
10
|
No
match
|
|
TGACCAATAG
|
10
|
No
match
|
|
AATCCCAATG
|
10
|
Plastin
1 (I isoform)
|
|
GCGAACTGGG
|
18
|
ORPHAN
RECEPTOR TR4
|
|
GCAACACTAA
|
11
|
No
match
|
|
GTAATGGATT
|
11
|
No
match
|
|
AGCAGACGTG
|
11
|
No
match
|
|
GGATTCGGTC
|
17
|
No
match
|
|
CGGAAGGCGG
|
14
|
No
match
|
|
TGTAAGTACG
|
14
|
No
match
|
|
GATCAGTCAT
|
11
|
No
match
|
|
GCTCAGAGTT
|
11
|
No
match
|
|
TAACCTCCCC
|
241
|
No
match
|
|
AGGAACAACT
|
16
|
No
match
|
|
GGGTCCGTGG
|
16
|
No
match
|
|
TAGCAAAATA
|
13
|
No
match
|
|
GCTGTGCACA
|
11
|
No
match
|
|
CAGAAAATCA
|
11
|
No
match
|
|
GATTTGCTGG
|
11
|
No
match
|
|
GTGCCATTCT
|
309
|
No
match
|
|
GATATTTGTC
|
108
|
5,6-DIHYDROXYINDOLE-2-CARBOXYLIC
ACID OXIDASE PRECURSOR
|
|
TATGATTTTA
|
106
|
ESTs
|
|
TCACTGCAAC
|
73
|
5,6-DIHYDROXYINDOLE-2-CARBOXYLIC
ACID OXIDASE PRECURSOR
|
|
CCCAGTCACA
|
57
|
ESTs,
Weakly similar to LACTOSE PERMEASE [Escherichia
coli]
|
|
TATGAGAACC
|
46
|
ESTs,
Highly similar to HIGH AFFIMMUNOGLOBULIN GAMMA
FC RECEPTOR I PRECURSOR [Homo sapiens]
|
|
GAGTTTAGTG
|
43
|
No
match
|
|
CTCCACTCTG
|
41
|
No
match
|
|
ATCCAGTGAC
|
38
|
No
match
|
|
TGATCTTGAG
|
38
|
ESTs,
Moderately similar to PAS protein 5 [H.sapiens]
|
|
AATGGCTGTT
|
33
|
Human
melanoma antigen recognized by T-cells (MART-1)
mRNA
|
|
ATACTAAAAA
|
33
|
Human
cysteine protease CPP32 isoform alpha mRNA,
complete cds
|
|
ATACTAAAAA
|
33
|
EST
|
|
GTTTATTAAA
|
27
|
PROTEIN-TYROSINE
PHOSPHATASE ZETA PRECURSOR
|
|
AGAAATCAGT
|
24
|
No
match
|
|
TTGGATATTA
|
24
|
Homo
sapiens clone 23785 mRNA sequence
|
|
AATTGAGTAG
|
24
|
Human
DNA sequence from PAC 257A7 on chromosome
6p24. Contains two unknown genes and ESTs,
STSs and a GSS
|
|
TGAGTGCTGC
|
24
|
No
match
|
|
GCAGTACAGT
|
22
|
No
match
|
|
GAATTCAGGA
|
19
|
Homo
sapiens mRNA for KIAA0679 protein, partial
cds
|
|
GACTTCTTTA
|
19
|
No
match
|
|
GAATTCAGGA
|
19
|
Homo
sapiens melastatin 1 (MLSN1) mRNA, complete
cds
|
|
GTTTATACTG
|
19
|
No
match
|
|
GAATTCAGGA
|
19
|
Homo
sapiens mRNA for synaptosome associated protein
of 23 kilodaltons, isoform A
|
|
GCCCGTGTAG
|
16
|
Msh
(Drosophila) homeo box homolog 1 (formerly
homeo box 7)
|
|
TGGGGTGTGC
|
16
|
Homo
sapiens thyroid receptor interactor (TRIP8)
mRNA, 3' end of cds
|
|
AATTTTTATG
|
14
|
Interferon
regulatory factor 4
|
|
TCAGTGTCTG
|
14
|
ESTs
|
|
GGAGGTCAGC
|
14
|
ESTs
|
|
TTCTTCTCAA
|
14
|
ESTs
|
|
TTCTTCTCAA
|
14
|
ESTs
|
|
GGTTGTCTCT
|
14
|
ESTs,
Weakly similar to line-1 protein ORF2 [H.sapiens]
|
|
CTTTGTTTAC
|
14
|
No
match
|
|
CACTATAGAA
|
14
|
No
match
|
|
TTTGGTTACA
|
11
|
EST
|
|
TCAAAACAAT
|
11
|
Human
R kappa B mRNA, complete cds
|
|
TTTGGTTACA
|
11
|
Homo
sapiens clone 23688 mRNA sequence
|
|
TATAGAGCAA
|
11
|
No
match
|
|
TAATAACCAG
|
11
|
No
match
|
|
TTCTATACTG
|
11
|
No
match
|
|
GGAATACGGC
|
11
|
No
match
|
|
GAACTGGCA
|
9
|
No
match
|
|
AATGTTGGGG
|
9
|
No
match
|
|
CGACAAACTA
|
12
|
No
match
|
|
GTAGCACAGA
|
12
|
No
match
|
|
ACCGTCAATC
|
12
|
No
match
|
|
TGGATCAGTC
|
12
|
Human
mRNA for KIAA0259 gene, partial cds
|
|
TGGCTCGGTC
|
12
|
EST
|
|
GCGACTGCGA
|
12
|
No
match
|
|
GCACTAGCTG
|
9
|
No
match
|
|
GCGGCCGGTT
|
9
|
No
match
|
|
CGGCAGTCCC
|
9
|
No
match
|
|
GCCCACCTGT
|
9
|
No
match
|
|
CGGCGGATGG
|
9
|
No
match
|
|
CCCCAGGCCG
|
9
|
No
match
|
|
CCCATTCCAA
|
9
|
No
match
|
|
TCAAGAGGTG
|
9
|
No
match
|
|
ATAACTGTTG
|
9
|
Human
HFREP-1 mRNA for unknown protein, complete
cds
|
|
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