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Table 2. Expressed transcripts from 3.5 million transcripts

Unique transcripts detected in 3,496,829 total transcripts. Transcript Tag denotes the 10bp tag adjacent to the 4bp NlaIII anchoring enzyme site, Copies/Cell denotes the transcript copies per cell expressed, and UniGene Description provides a functional description of each matching UniGene cluster (from UniGene Build No. 67). Transcripts expressed at >500 transcript copies per cell are listed. Entire transcript table can be downloaded as a Microsoft Access spreadsheet: Table 2.mdb

Tag Sequence

Copies/Cell

UniGene Description

CCCATCGTCC

3022

Tag matches mitochondrial sequence

GTGACCACGG

2435

Tag matches ribosomal RNA sequence / Human N-methyl-D-aspartate receptor 2C subunit precursor (NMDAR2C) mRNA

TGTGTTGAGA

1557

Translation elongation factor 1-alpha-1

GTGAAACCCC

1466

Multiple matches

CCTGTAATCC

1403

Multiple matches

CTAAGACTTC

1349

Tag matches mitochondrial sequence

CACCTAATTG

1333

Tag matches mitochondrial sequence

CCCGTCCGGA

1282

60S RIBOSOMAL PROTEIN L13

TTGGTCCTCT

1238

60S RIBOSOMAL PROTEIN L41

ATGGCTGGTA

1126

40S RIBOSOMAL PROTEIN S2

TTGGGGTTTC

1099

Ferritin heavy chain

CCACTGCACT

964

Multiple matches

TGATTTCACT

942

Tag matches mitochondrial sequence / EST

ACTTTTTCAA

899

Tag matches mitochondrial sequence

GCAGCCATCC

886

Ribosomal protein L28

TACCATCAAT

874

Glyceraldehyde-3-phosphate dehydrogenase

GGATTTGGCC

854

Ribosomal protein, large P2 / Ribosomal protein S26 / Human mRNA for PIG-B

CCCTGGGTTC

844

Ferritin, light polypeptide

GCCGAGGAAG

836

Human mRNA for ribosomal protein S12

AGGCTACGGA

820

60S RIBOSOMAL PROTEIN L13A

CGCCGCCGGC

805

Human ribosomal protein L35 mRNA, complete cds

TTCATACACC

804

Tag matches mitochondrial sequence

AGCCCTACAA

801

Tag matches mitochondrial sequence

CACAAACGGT

799

40S RIBOSOMAL PROTEIN S27

AAGGTGGAGG

786

60S RIBOSOMAL PROTEIN L18A

CTTCCTTGCC

777

Keratin 17

TGGTGTTGAG

770

Human DNA sequence from clone 1033B10 on chromosome 6p21.2-21.31

GTGAAACCCT

728

Multiple matches

GGGGAAATCG

724

THYMOSIN BETA-10

AGCACCTCCA

718

Eukaryotic translation elongation factor 2

CCTCCAGCTA

711

Keratin 8

AAGACAGTGG

699

Ribosomal protein L37a

CTGGGTTAAT

699

40S RIBOSOMAL PROTEIN S19

ATTTGAGAAG

689

Tag matches mitochondrial sequence

GCCGGGTGGG

687

Basigin

GGGCTGGGGT

683

H.sapiens mRNA for ribosomal protein L29 / Homo sapiens sperm acrosomal protein mRNA

AGGGCTTCCA

663

UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX SUBUNIT VI REQUIRING PROTEIN

AAAAAAAAAA

650

Multiple matches

GAGGGAGTTT

648

Ribosomal protein L27a

GCGACCGTCA

637

Aldolase A

ACTAACACCC

631

Tag matches mitochondrial sequence

CGCCGGAACA

616

Ribosomal protein L4

TGGGCAAAGC

592

Translation elongation factor 1 gamma

TGCACGTTTT

586

Human mRNA for antileukoprotease (ALP) from cervix uterus

AATCCTGTGG

569

Ribosomal protein L8

CAAGCATCCC

565

Tag matches mitochondrial sequence

CCGTCCAAGG

559

Ribosomal protein S16

TAGGTTGTCT

551

TRANSLATIONALLY CONTROLLED TUMOR PROTEIN

GCCGTGTCCG

540

Human ribosomal protein S6 mRNA, complete cds

GCTTTATTTG

540

Human mRNA fragment encoding cytoplasmic actin

CTAGCCTCAC

539

Actin, gamma 1

CCTAGCTGGA

537

PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A

GCCCCTGCTG

534

Keratin 5 (epidermolysis bullosa simplex, Dowling-Meara/Kobner/Weber-Cockayne types)

ACCCTTGGCC

526

Tag matches mitochondrial sequence

AGGAAAGCTG

513

ESTs, Highly similar to 60S RIBOSOMAL PROTEIN L36 [Rattus norvegicus]

 

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