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Table 1. Tissues and transcript tags analyzed

Tissues represents the source of the RNA analyzed, Libraries indicates the number of SAGE libraries analyzed, Total Transcripts is the total number of transcripts analyzed from each tissue, and Unique Genes denotes the number of unique genes that are expressed in each tissue.

Normal tissues

Libraries

Total Transcripts

Unique Genes

Colon epithelium1,2

2

98,089

12,941

Keratinocytes3

2

83,835

12,598

Breast epithelium3

2

107,632

13,429

Lung epithelium4

2

111,848

11,636

Melanocytes3

2

110,631

14,824

Prostate3

2

98,010

9,786

Monocytes3

3

66,673

9,504

Kidney epithelium3

2

103,836

15,094

Chondrocytes3

4

88,875

11,628

Cardiomyocytes3

4

77,374

9,449

Brain2

3

202,448

23,580

 

Diseased Tissues

     

Colon cancer1,2,3

22

1,004,509

56,153

Pancreatic cancer1

4

126,414

17,050

Breast cancer3

5

226,630

18,685

Lung cancer4

5

221,302

22,783

Melanoma3

10

269,332

25,600

Polycystic kidney disease3

2

112,839

16,280

Hemangiopericytoma3

5

199,985

31,351

Brain cancer3

3

186,567

23,108

 

Total

84

3,496,829

84,103

 

1References 5,6,7,8

2Reference 9

3Unpublished

4Reference10

 

 

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